STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109004943Vacuolar-processing enzyme-like. (457 aa)    
Predicted Functional Partners:
LOC109003280
Probable cysteine protease RD19D; Belongs to the peptidase C1 family.
   
 
 0.525
LOC108981347
Low-temperature-induced cysteine proteinase-like; Belongs to the peptidase C1 family.
   
 
 0.499
LOC108985752
Cysteine proteinase COT44-like; Belongs to the peptidase C1 family.
   
 
 0.499
LOC108990396
Low-temperature-induced cysteine proteinase-like; Belongs to the peptidase C1 family.
   
 
 0.499
LOC108991338
Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family.
   
 
 0.499
LOC109003391
Cysteine proteinase RD21A-like; Belongs to the peptidase C1 family.
   
 
 0.499
LOC109009110
Cysteine proteinase COT44-like; Belongs to the peptidase C1 family.
   
 
 0.499
LOC109011295
Low-temperature-induced cysteine proteinase-like; Belongs to the peptidase C1 family.
   
 
 0.499
LOC109014296
Cysteine proteinase RD21A-like; Belongs to the peptidase C1 family.
   
 
 0.499
LOC109014297
Oryzain alpha chain-like; Belongs to the peptidase C1 family.
   
 
 0.499
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.