STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109005039Ankyrin repeat-containing protein At5g02620. (595 aa)    
Predicted Functional Partners:
LOC109001960
Kinesin-like calmodulin-binding protein isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.496
LOC108993203
Potassium channel SKOR-like isoform X1.
  
   
 0.493
LOC109019063
Potassium channel SKOR-like isoform X1.
  
   
 0.488
LOC109011223
Potassium channel AKT1-like.
  
     0.464
LOC109020689
Potassium channel AKT1-like.
  
     0.454
LOC108980171
Serine/threonine-protein phosphatase BSL1-like.
    
  0.439
LOC108994484
Serine/threonine-protein phosphatase.
    
  0.439
LOC109000955
Serine/threonine-protein phosphatase BSL1-like.
    
  0.439
LOC109007686
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. BSU subfamily.
    
  0.439
LOC108981862
Protein phosphatase 1 regulatory subunit 12C-like.
  
   
 0.423
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.