STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109007040F-box protein At1g10780-like isoform X1. (441 aa)    
Predicted Functional Partners:
LOC108984250
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.501
LOC109000903
Uncharacterized protein LOC109000903.
  
     0.497
LOC108996651
Uncharacterized protein LOC108996651 isoform X1.
  
     0.493
LOC109012908
Uncharacterized protein LOC109012908.
  
     0.492
LOC109014195
Uncharacterized protein LOC109014195.
  
     0.486
LOC108995915
F-box/LRR-repeat protein 17-like.
  
     0.481
LOC108984847
F-box/LRR-repeat protein 17-like.
  
     0.479
LOC108985099
Auxin-responsive protein SAUR72-like.
  
     0.478
LOC109004051
Uncharacterized protein LOC109004051.
  
     0.477
LOC109001241
Gibberellin-regulated protein 6-like.
  
     0.475
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.