STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109008301Transmembrane protein 184B. (421 aa)    
Predicted Functional Partners:
LOC108985759
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.626
LOC109009288
Protein HASTY 1.
      
 0.503
LOC109002305
Multiple organellar RNA editing factor 1, mitochondrial.
    
   0.495
LOC108994615
Uncharacterized protein LOC108994615.
      
 0.404
LOC108998208
Uncharacterized protein LOC108998208.
      
 0.404
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.