Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC109008901Mitogen-activated protein kinase kinase kinase YODA-like. (634 aa)    
Predicted Functional Partners:
LOC108982672
Mitogen-activated protein kinase kinase kinase YODA-like.
     
  0.742
LOC109014474
Mitogen-activated protein kinase kinase kinase YODA.
     
  0.742
LOC108982249
LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase 10-like; Belongs to the protein kinase superfamily.
  
 
0.616
LOC109019062
Mitogen-activated protein kinase kinase 9-like; Belongs to the protein kinase superfamily.
  
 
0.612
LOC109004997
Mitogen-activated protein kinase kinase 5-like; Belongs to the protein kinase superfamily.
  
 
0.611
LOC108983062
Mitogen-activated protein kinase kinase 5-like; Belongs to the protein kinase superfamily.
  
 
0.608
LOC109018330
Mitogen-activated protein kinase kinase 10-like; Belongs to the protein kinase superfamily.
  
 
0.608
LOC108983535
Uncharacterized protein LOC108983535.
    
 0.577
LOC108988810
Mitogen-activated protein kinase kinase 10-like; Belongs to the protein kinase superfamily.
    
 0.558
LOC108993253
Mitogen-activated protein kinase kinase 9-like; Belongs to the protein kinase superfamily.
    
 0.558
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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