STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109010142BTB/POZ domain-containing protein At3g22104 isoform X1; Belongs to the NPH3 family. (542 aa)    
Predicted Functional Partners:
LOC109013602
Transcription repressor OFP13-like.
  
     0.435
LOC108983224
Transcription repressor OFP13-like.
  
     0.434
LOC109005455
Probable E3 ubiquitin-protein ligase XBOS32.
      
 0.418
LOC109011721
Uncharacterized protein LOC109011721.
  
     0.417
LOC109015532
Crocetin glucosyltransferase 3-like.
  
     0.402
LOC109002013
Uncharacterized protein LOC109002013.
  
     0.401
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.