STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109011581Autophagy-related protein. (133 aa)    
Predicted Functional Partners:
LOC108998412
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.991
LOC108985869
Protein NBR1 homolog.
   
 0.979
LOC108985872
Protein NBR1 homolog.
   
 0.979
LOC108985868
Protein NBR1 homolog.
   
 0.979
LOC109005540
Protein NBR1 homolog isoform X1.
   
 0.979
LOC109017885
Protein NBR1 homolog.
   
 0.979
LOC109017886
Protein NBR1 homolog.
   
 0.979
LOC109019380
Protein NBR1 homolog.
   
 0.979
LOC109020723
Protein NBR1 homolog isoform X1.
   
 0.979
LOC109021765
Protein NBR1 homolog.
   
 0.979
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.