STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109011935Uncharacterized protein LOC109011935. (1292 aa)    
Predicted Functional Partners:
LOC109006134
Protein IQ-DOMAIN 1.
  
     0.511
LOC109012720
ENHANCER OF AG-4 protein 2-like.
  
     0.498
LOC109008226
Aberrant root formation protein 4 isoform X1.
  
    0.495
LOC108995591
Thylakoid lumenal 16.5 kDa protein, chloroplastic-like.
  
     0.494
LOC108983778
Probable RNA polymerase II transcription factor B subunit 1-3.
  
     0.489
LOC109010435
Uncharacterized protein LOC109010435 isoform X1.
  
     0.481
LOC109003971
Mediator of RNA polymerase II transcription subunit 23-like.
  
     0.480
LOC109003972
Mediator of RNA polymerase II transcription subunit 23-like.
  
     0.477
LOC108985854
Uncharacterized protein LOC108985854 isoform X1.
  
     0.474
LOC109019677
Uncharacterized protein LOC109019677.
  
     0.474
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.