STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109012171Uncharacterized protein LOC109012171. (230 aa)    
Predicted Functional Partners:
LOC108983089
Uncharacterized protein LOC108983089.
  
     0.499
LOC109001432
Uncharacterized protein LOC109001432.
  
     0.499
LOC109018130
Uncharacterized protein LOC109018130.
  
     0.476
LOC109007505
Mitochondrial import inner membrane translocase subunit TIM22-like.
  
     0.443
LOC108996624
Uncharacterized protein LOC108996624.
  
     0.441
LOC109019802
Cell division topological specificity factor homolog, chloroplastic-like isoform X1.
  
     0.425
LOC109017206
Cell division topological specificity factor homolog, chloroplastic-like isoform X2.
  
     0.424
LOC108979244
AP2-like ethylene-responsive transcription factor AIL5.
  
     0.414
LOC109002892
Cell division topological specificity factor homolog, chloroplastic-like isoform X1.
  
     0.413
LOC108980629
Cell division topological specificity factor homolog, chloroplastic-like isoform X1.
  
     0.405
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.