STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109013502Fasciclin-like arabinogalactan protein 17. (469 aa)    
Predicted Functional Partners:
LOC108979029
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like.
    
 
 0.447
LOC109011186
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
    
 
 0.447
LOC108987152
NAD(P)H-quinone oxidoreductase subunit S, chloroplastic.
    
   0.445
LOC109009058
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family.
    
   0.445
LOC108990049
Fasciclin-like arabinogalactan protein 12.
  
 
 0.422
LOC108990064
Fasciclin-like arabinogalactan protein 12.
  
 
 0.405
LOC108997573
UPF0496 protein At2g18630-like.
  
    0.404
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.