STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109015411Trihelix transcription factor PTL-like. (553 aa)    
Predicted Functional Partners:
LOC109022173
Transcription factor TCP9-like.
  
     0.460
LOC109011029
Transcription factor TCP9-like.
  
     0.443
LOC109015671
NAC domain-containing protein 17-like.
  
     0.429
LOC109022232
Protein CUP-SHAPED COTYLEDON 3-like.
  
   
 0.422
LOC108979910
NAC domain-containing protein 86-like.
  
     0.411
LOC109011371
NAC domain-containing protein 17-like isoform X2.
  
     0.411
LOC109004777
NAC domain-containing protein 83-like.
  
     0.403
LOC109020169
Protein CUP-SHAPED COTYLEDON 3-like.
  
   
 0.402
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.