Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108982541 | LOC109017951 | A0A2I4DQR9 | A0A2I4HHN5 | Somatic embryogenesis receptor kinase 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | Probable leucine-rich repeat receptor-like protein kinase At1g35710. | 0.425 |
LOC108987611 | LOC108992305 | A0A2I4E9L6 | A0A2I4ESL9 | BRI1 kinase inhibitor 1-like. | BRI1 kinase inhibitor 1-like. | 0.901 |
LOC108987611 | LOC109017951 | A0A2I4E9L6 | A0A2I4HHN5 | BRI1 kinase inhibitor 1-like. | Probable leucine-rich repeat receptor-like protein kinase At1g35710. | 0.424 |
LOC108991521 | LOC109017951 | A0A2I4EPL1 | A0A2I4HHN5 | Somatic embryogenesis receptor kinase 2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | Probable leucine-rich repeat receptor-like protein kinase At1g35710. | 0.424 |
LOC108992305 | LOC108987611 | A0A2I4ESL9 | A0A2I4E9L6 | BRI1 kinase inhibitor 1-like. | BRI1 kinase inhibitor 1-like. | 0.901 |
LOC108992305 | LOC109017951 | A0A2I4ESL9 | A0A2I4HHN5 | BRI1 kinase inhibitor 1-like. | Probable leucine-rich repeat receptor-like protein kinase At1g35710. | 0.424 |
LOC109017951 | LOC108982541 | A0A2I4HHN5 | A0A2I4DQR9 | Probable leucine-rich repeat receptor-like protein kinase At1g35710. | Somatic embryogenesis receptor kinase 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.425 |
LOC109017951 | LOC108987611 | A0A2I4HHN5 | A0A2I4E9L6 | Probable leucine-rich repeat receptor-like protein kinase At1g35710. | BRI1 kinase inhibitor 1-like. | 0.424 |
LOC109017951 | LOC108991521 | A0A2I4HHN5 | A0A2I4EPL1 | Probable leucine-rich repeat receptor-like protein kinase At1g35710. | Somatic embryogenesis receptor kinase 2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.424 |
LOC109017951 | LOC108992305 | A0A2I4HHN5 | A0A2I4ESL9 | Probable leucine-rich repeat receptor-like protein kinase At1g35710. | BRI1 kinase inhibitor 1-like. | 0.424 |