STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109018377Probable low-specificity L-threonine aldolase 1. (358 aa)    
Predicted Functional Partners:
LOC108994646
Serine--glyoxylate aminotransferase.
    
 0.977
LOC108999263
Serine--glyoxylate aminotransferase.
    
 0.977
LOC109009676
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.977
LOC108985026
Threonine dehydratase.
  
 
 0.948
LOC109008462
Threonine dehydratase.
  
 
 0.948
LOC108988729
Probable sarcosine oxidase.
    
 0.936
LOC109009560
Probable sarcosine oxidase.
    
 0.936
LOC108981297
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.926
LOC108984655
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.926
LOC108992466
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.926
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.