STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10901869740S ribosomal protein S24-1-like. (164 aa)    
Predicted Functional Partners:
LOC109004188
40S ribosomal protein S10-1-like.
   
 0.989
LOC108994828
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
  
 0.973
LOC108994966
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
  
 0.973
LOC109007545
ubiquitin-60S ribosomal protein L40.
  
 0.973
LOC109012195
Ubiquitin.
  
 0.973
LOC109019495
60S ribosomal protein L39-3.
   
 
 0.972
LOC108993887
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.970
LOC109016107
40S ribosomal protein S23-like; Belongs to the universal ribosomal protein uS12 family.
   
 0.970
LOC108983888
Eukaryotic translation initiation factor 2 subunit alpha homolog.
   
 0.960
LOC108994764
40S ribosomal protein S28-2-like.
  
 0.952
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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