STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109019530Phytosulfokines-like. (81 aa)    
Predicted Functional Partners:
LOC109014558
Protein FAR1-RELATED SEQUENCE 5-like.
  
     0.534
LOC108989176
Uncharacterized protein LOC108989176.
  
     0.506
LOC108982466
Uncharacterized protein LOC108982466 isoform X1.
  
     0.495
LOC109017170
Uncharacterized protein LOC109017170.
  
     0.491
LOC108992467
Protein FAR1-RELATED SEQUENCE 12-like isoform X1.
  
     0.489
LOC108997279
Protein FAR1-RELATED SEQUENCE 12-like.
  
     0.489
LOC108981553
Probable tyrosine-protein phosphatase At1g05000.
      
 0.478
LOC108985329
Probable aspartyl protease At4g16563; Belongs to the peptidase A1 family.
  
     0.456
LOC109011632
Probable aspartyl protease At4g16563; Belongs to the peptidase A1 family.
  
     0.453
LOC108989930
Uncharacterized protein LOC108989930.
  
     0.446
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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