STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109020426Pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like. (123 aa)    
Predicted Functional Partners:
LOC109019172
Uncharacterized protein LOC109019172.
  
     0.525
LOC109015426
selT-like protein.
  
     0.524
LOC108984895
lysM domain-containing GPI-anchored protein 1-like.
  
    0.521
LOC108983871
Uncharacterized protein LOC108983871.
  
     0.515
LOC109020819
Heavy metal-associated isoprenylated plant protein 21-like.
  
     0.515
LOC108980619
Uncharacterized protein At1g66480-like.
  
     0.508
LOC108996957
Non-specific lipid-transfer protein 1-like; Belongs to the plant LTP family.
  
     0.508
LOC109007198
Uncharacterized protein LOC109007198 isoform X1.
  
     0.507
LOC108997242
Putative UPF0481 protein At3g02645.
  
     0.506
LOC109010181
Uncharacterized protein LOC109010181.
  
     0.506
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.