STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109020504Protein ROOT PRIMORDIUM DEFECTIVE 1. (472 aa)    
Predicted Functional Partners:
LOC108985311
Fasciclin-like arabinogalactan protein 1.
  
     0.526
LOC109000734
Fasciclin-like arabinogalactan protein 2.
  
     0.512
LOC108995352
Uncharacterized protein LOC108995352.
  
     0.508
LOC109013537
Protein YLS9-like.
  
     0.502
LOC108995936
rho-N domain-containing protein 1, chloroplastic-like.
  
     0.500
LOC108997542
Uncharacterized protein LOC108997542.
  
     0.500
LOC108985526
Armadillo repeat-containing kinesin-like protein 3.
  
  
 0.498
LOC109012214
Uncharacterized protein LOC109012214.
  
     0.496
LOC109016783
Protein ESKIMO 1-like.
  
     0.493
LOC109009302
Uncharacterized protein LOC109009302.
  
     0.486
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.