STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109021156Serine/threonine-protein kinase MARK2-like. (700 aa)    
Predicted Functional Partners:
LOC108992129
Uncharacterized protein LOC108992129.
  
     0.496
LOC108995474
Pentatricopeptide repeat-containing protein At4g01570.
  
    0.486
LOC109019410
Uncharacterized protein LOC109019410.
  
     0.485
LOC109007204
Uncharacterized protein LOC109007204.
  
     0.482
LOC108986673
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.473
LOC108988257
Condensin complex subunit 3 isoform X1.
  
    0.469
LOC109005926
Uncharacterized protein LOC109005926.
  
     0.444
LOC108996345
Serine/threonine-protein kinase ATG1t.
    
 
0.439
LOC108984099
Uncharacterized protein LOC108984099.
  
     0.425
LOC109004140
Putative pentatricopeptide repeat-containing protein At1g02420.
  
    0.420
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.