STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109021460Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)    
Predicted Functional Partners:
LOC109019495
60S ribosomal protein L39-3.
  
 0.995
LOC109004188
40S ribosomal protein S10-1-like.
   
 
 0.991
LOC109005829
60S ribosomal protein L5-like.
  
 0.991
LOC109014351
60S ribosomal protein L5.
  
 0.991
LOC108985511
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.989
LOC108988566
60S ribosomal protein L26-1-like.
  
 0.989
LOC108996394
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.989
LOC108998855
60S ribosomal protein L13-1-like.
   
 0.989
LOC109000709
60S ribosomal protein L32-1-like.
   
 0.989
LOC109005687
60S ribosomal protein L26-1.
  
 0.989
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.