STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109021559LOW QUALITY PROTEIN: methionine adenosyltransferase 2 subunit beta. (318 aa)    
Predicted Functional Partners:
LOC108992094
Ergosterol biosynthetic protein 28.
   
 
 0.936
LOC108997326
Sterol 14-demethylase; Belongs to the cytochrome P450 family.
   
 0.883
LOC109006716
Sterol 14-demethylase-like; Belongs to the cytochrome P450 family.
   
 0.883
LOC108981850
Methylsterol monooxygenase 1-1-like; Belongs to the sterol desaturase family.
   
 0.813
LOC108995763
Methylsterol monooxygenase 2-2; Belongs to the sterol desaturase family.
   
 0.813
LOC108998492
Methylsterol monooxygenase 2-2-like; Belongs to the sterol desaturase family.
   
 0.813
LOC108999992
Methylsterol monooxygenase 1-2-like; Belongs to the sterol desaturase family.
   
 0.813
LOC109011030
Methylsterol monooxygenase 1-1-like; Belongs to the sterol desaturase family.
   
 0.813
LOC109017825
Methylsterol monooxygenase 2-2-like.
   
 0.813
LOC108984792
Delta(14)-sterol reductase.
   
 
 0.788
Your Current Organism:
Juglans regia
NCBI taxonomy Id: 51240
Other names: English walnut, J. regia, Juglans regia L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.