STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCRO_0065ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (306 aa)    
Predicted Functional Partners:
cbiO1
Cobalt ABC transporter, ATP-binding protein CbiO 1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
0.909
oppD_2
Oligopeptide ABC transporter, ATP-binding protein OppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
     
0.903
MCRO_0536
Putative membrane protein.
 
 
 0.880
MCRO_0506
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  0.868
MCRO_0064
Putative membrane protein.
       0.757
MCRO_0507
Multidrug ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
0.660
MCRO_0272
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
  0.643
MCRO_0105
Conserved hypothetical protein.
  
   0.623
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
   0.607
msbA_2
Multidrug/protein/lipid ABC exporter, ATP-binding/permease protein MsbA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
0.593
Your Current Organism:
Mycoplasma crocodyli
NCBI taxonomy Id: 512564
Other names: M. crocodyli MP145, Mycoplasma crocodyli ATCC 51981, Mycoplasma crocodyli MP145, Mycoplasma crocodyli str. MP145, Mycoplasma crocodyli strain MP145
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