STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCRO_0249Hypothetical protein; Identified by glimmer; putative. (755 aa)    
Predicted Functional Partners:
MCRO_0248
Hypothetical protein; Identified by glimmer; putative.
 
     0.950
MCRO_0252
Conserved hypothetical protein.
 
     0.774
MCRO_0618
Putative intrinsic membrane protein.
 
    0.767
MCRO_0707
Putative membrane lipoprotein P80; Identified by match to protein family HMM PF03202; match to protein family HMM PF03305.
 
     0.763
MCRO_0553
Metal cation transporter, ZIP family; Identified by match to protein family HMM PF02535.
  
     0.762
MCRO_0329
DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.
  
     0.756
MCRO_0359
Putative membrane protein.
  
     0.756
MCRO_0279
Putative lipoprotein.
  
     0.740
MCRO_0180
Putative amino acid permease; Identified by match to protein family HMM PF00324.
 
     0.735
MCRO_0746
Putative membrane protein P80.
  
     0.733
Your Current Organism:
Mycoplasma crocodyli
NCBI taxonomy Id: 512564
Other names: M. crocodyli MP145, Mycoplasma crocodyli ATCC 51981, Mycoplasma crocodyli MP145, Mycoplasma crocodyli str. MP145, Mycoplasma crocodyli strain MP145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.