Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MCRO_0395 | MCRO_0583 | MCRO_0395 | MCRO_0583 | Short-chain-alcohol dehydrogenase; Identified by match to protein family HMM PF00106. | RNA (S1 domain)-binding protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. | 0.502 |
| MCRO_0583 | MCRO_0395 | MCRO_0583 | MCRO_0395 | RNA (S1 domain)-binding protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. | Short-chain-alcohol dehydrogenase; Identified by match to protein family HMM PF00106. | 0.502 |
| MCRO_0583 | MCRO_0584 | MCRO_0583 | MCRO_0584 | RNA (S1 domain)-binding protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. | Hypothetical protein; Identified by glimmer; putative. | 0.807 |
| MCRO_0583 | rpoA | MCRO_0583 | MCRO_0156 | RNA (S1 domain)-binding protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
| MCRO_0583 | rpoB | MCRO_0583 | MCRO_0331 | RNA (S1 domain)-binding protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.955 |
| MCRO_0584 | MCRO_0583 | MCRO_0584 | MCRO_0583 | Hypothetical protein; Identified by glimmer; putative. | RNA (S1 domain)-binding protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. | 0.807 |
| MCRO_0584 | rpoA | MCRO_0584 | MCRO_0156 | Hypothetical protein; Identified by glimmer; putative. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.407 |
| rpoA | MCRO_0583 | MCRO_0156 | MCRO_0583 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA (S1 domain)-binding protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. | 0.970 |
| rpoA | MCRO_0584 | MCRO_0156 | MCRO_0584 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein; Identified by glimmer; putative. | 0.407 |
| rpoA | rpoB | MCRO_0156 | MCRO_0331 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | MCRO_0583 | MCRO_0331 | MCRO_0583 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA (S1 domain)-binding protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. | 0.955 |
| rpoB | rpoA | MCRO_0331 | MCRO_0156 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |