STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCRO_0661Conserved hypothetical protein; Identified by match to protein family HMM TIGR02184. (780 aa)    
Predicted Functional Partners:
MCRO_0103
Conserved hypothetical protein.
 
   
 0.802
MCRO_0610
Lipoprotein.
 
   
 0.801
MCRO_0105
Conserved hypothetical protein.
 
     0.799
MCRO_0536
Putative membrane protein.
  
     0.772
MCRO_0487
Phosphate/phosphonate ABC transporter, solute-binding protein; Identified by match to protein family HMM PF06646.
  
     0.762
MCRO_0707
Putative membrane lipoprotein P80; Identified by match to protein family HMM PF03202; match to protein family HMM PF03305.
 
 
 0.737
licA
PTS system, lichenan-specific IIA component LicA; Identified by match to protein family HMM PF01633; match to protein family HMM PF01636.
  
     0.728
lemA_1
LemA protein of unknown function.
 
     0.652
phnC
Phosphate/phosphonate ABC transporter, ATP-binding protein PhnC; Identified by match to protein family HMM PF00005.
 
     0.629
MCRO_0618
Putative intrinsic membrane protein.
 
     0.592
Your Current Organism:
Mycoplasma crocodyli
NCBI taxonomy Id: 512564
Other names: M. crocodyli MP145, Mycoplasma crocodyli ATCC 51981, Mycoplasma crocodyli MP145, Mycoplasma crocodyli str. MP145, Mycoplasma crocodyli strain MP145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.