STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_13240Putative bifunctional DNA primase/polymerase. (226 aa)    
Predicted Functional Partners:
AMIS_13250
Putative transcriptional regulator.
 
     0.774
AMIS_12250
Hypothetical protein.
  
     0.736
AMIS_61250
Putative DNA-binding protein.
  
     0.723
AMIS_42080
Hypothetical protein.
  
     0.721
AMIS_9920
Putative DNA-binding protein.
  
     0.694
AMIS_53060
Putative DNA-binding protein.
  
     0.678
AMIS_78890
Putative DNA-binding protein.
  
     0.678
AMIS_73700
Putative peptidase.
  
     0.674
AMIS_8710
Putative DNA-binding protein.
  
     0.664
AMIS_1280
Hypothetical protein.
  
     0.654
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.