STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_15060Hypothetical protein. (129 aa)    
Predicted Functional Partners:
AMIS_14220
Putative cytochrome c heme-binding subunit.
  
     0.747
AMIS_14160
Hypothetical protein.
  
     0.733
AMIS_14230
Putative ubiquinol-cytochrome c reductase iron-sulphur subunit.
  
     0.678
AMIS_15050
Putative phosphodiesterase/nucleotide pyrophosphatase.
 
     0.639
AMIS_14240
Putative cytochrome b subunit.
  
     0.617
AMIS_15040
Putative methyltransferase.
       0.602
AMIS_16240
Putative cytochrome oxidase assembly protein.
  
     0.571
AMIS_7580
Putative septum formation initiator.
 
     0.566
dnaE2
Putative DNA polymerase III alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.535
AMIS_13280
Hypothetical protein.
  
     0.510
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.