Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_13370 | AMIS_16790 | Hypothetical protein. | Putative integral membrane protein. | 0.523 |
AMIS_16780 | AMIS_16790 | Putative GntR-family transcriptional regulator; Aminotransferase domain. | Putative integral membrane protein. | 0.708 |
AMIS_16790 | AMIS_13370 | Putative integral membrane protein. | Hypothetical protein. | 0.523 |
AMIS_16790 | AMIS_16780 | Putative integral membrane protein. | Putative GntR-family transcriptional regulator; Aminotransferase domain. | 0.708 |
AMIS_16790 | AMIS_24690 | Putative integral membrane protein. | Putative LuxR-family transcriptional regulator. | 0.498 |
AMIS_16790 | AMIS_31670 | Putative integral membrane protein. | Putative LuxR-family transcriptional regulator. | 0.479 |
AMIS_16790 | AMIS_31690 | Putative integral membrane protein. | Putative LuxR-family transcriptional regulator. | 0.458 |
AMIS_16790 | AMIS_31720 | Putative integral membrane protein. | Putative LuxR-family transcriptional regulator. | 0.427 |
AMIS_16790 | AMIS_39310 | Putative integral membrane protein. | Putative LuxR-family transcriptional regulator. | 0.433 |
AMIS_16790 | AMIS_46010 | Putative integral membrane protein. | Hypothetical protein; Radical SAM superfamily. | 0.448 |
AMIS_16790 | AMIS_60080 | Putative integral membrane protein. | Hypothetical protein; Radical SAM superfamily. | 0.416 |
AMIS_16790 | AMIS_71800 | Putative integral membrane protein. | Hypothetical protein. | 0.464 |
AMIS_24690 | AMIS_16790 | Putative LuxR-family transcriptional regulator. | Putative integral membrane protein. | 0.498 |
AMIS_31670 | AMIS_16790 | Putative LuxR-family transcriptional regulator. | Putative integral membrane protein. | 0.479 |
AMIS_31690 | AMIS_16790 | Putative LuxR-family transcriptional regulator. | Putative integral membrane protein. | 0.458 |
AMIS_31690 | AMIS_31720 | Putative LuxR-family transcriptional regulator. | Putative LuxR-family transcriptional regulator. | 0.604 |
AMIS_31720 | AMIS_16790 | Putative LuxR-family transcriptional regulator. | Putative integral membrane protein. | 0.427 |
AMIS_31720 | AMIS_31690 | Putative LuxR-family transcriptional regulator. | Putative LuxR-family transcriptional regulator. | 0.604 |
AMIS_39310 | AMIS_16790 | Putative LuxR-family transcriptional regulator. | Putative integral membrane protein. | 0.433 |
AMIS_46010 | AMIS_16790 | Hypothetical protein; Radical SAM superfamily. | Putative integral membrane protein. | 0.448 |
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