STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_16880Hypothetical protein. (120 aa)    
Predicted Functional Partners:
AMIS_16890
Putative carboxylesterase.
       0.762
AMIS_14980
Putative ArsR-family transcriptional regulator.
  
    0.555
AMIS_16900
Hypothetical protein.
       0.539
AMIS_45830
Hypothetical protein.
  
     0.524
AMIS_51320
Putative permease.
  
     0.512
AMIS_14970
Putative MFS transporter.
  
     0.506
AMIS_27610
Putative aminoglycoside 3-N-acetyltransferase.
  
     0.489
AMIS_45820
Putative ring-cleavage dioxygenase.
  
     0.428
AMIS_65930
Putative membrane protein.
  
     0.413
AMIS_75740
Putative prokaryotic phospholipase A2.
  
     0.411
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.