STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_17110Hypothetical protein. (318 aa)    
Predicted Functional Partners:
AMIS_18510
Hypothetical protein.
  
     0.570
AMIS_1100
Hypothetical protein.
  
     0.514
AMIS_67860
Hypothetical protein.
  
     0.497
AMIS_39510
Hypothetical protein.
  
     0.489
AMIS_74560
Hypothetical protein.
  
     0.487
AMIS_9620
Putative S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
  
     0.486
AMIS_66510
Hypothetical protein.
  
     0.483
AMIS_80580
Hypothetical protein.
  
     0.483
AMIS_7220
Hypothetical protein.
  
     0.442
AMIS_17100
Hypothetical protein.
       0.413
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.