Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMIS_14230 | AMIS_17640 | AMIS_14230 | AMIS_17640 | Putative ubiquinol-cytochrome c reductase iron-sulphur subunit. | Putative pyridine nucleotide-disulfide oxidoreductase. | 0.437 |
AMIS_17620 | AMIS_17630 | AMIS_17620 | AMIS_17630 | Putative PfkB-family carbohydrate kinase. | Putative PAS-sensor signal transduction histidine kinase. | 0.584 |
AMIS_17620 | AMIS_17640 | AMIS_17620 | AMIS_17640 | Putative PfkB-family carbohydrate kinase. | Putative pyridine nucleotide-disulfide oxidoreductase. | 0.417 |
AMIS_17630 | AMIS_17620 | AMIS_17630 | AMIS_17620 | Putative PAS-sensor signal transduction histidine kinase. | Putative PfkB-family carbohydrate kinase. | 0.584 |
AMIS_17630 | AMIS_17640 | AMIS_17630 | AMIS_17640 | Putative PAS-sensor signal transduction histidine kinase. | Putative pyridine nucleotide-disulfide oxidoreductase. | 0.536 |
AMIS_17640 | AMIS_14230 | AMIS_17640 | AMIS_14230 | Putative pyridine nucleotide-disulfide oxidoreductase. | Putative ubiquinol-cytochrome c reductase iron-sulphur subunit. | 0.437 |
AMIS_17640 | AMIS_17620 | AMIS_17640 | AMIS_17620 | Putative pyridine nucleotide-disulfide oxidoreductase. | Putative PfkB-family carbohydrate kinase. | 0.417 |
AMIS_17640 | AMIS_17630 | AMIS_17640 | AMIS_17630 | Putative pyridine nucleotide-disulfide oxidoreductase. | Putative PAS-sensor signal transduction histidine kinase. | 0.536 |
AMIS_17640 | AMIS_17650 | AMIS_17640 | AMIS_17650 | Putative pyridine nucleotide-disulfide oxidoreductase. | Putative subtilase-family protease; Belongs to the peptidase S8 family. | 0.560 |
AMIS_17640 | gpmA | AMIS_17640 | AMIS_76010 | Putative pyridine nucleotide-disulfide oxidoreductase. | Putative phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.416 |
AMIS_17650 | AMIS_17640 | AMIS_17650 | AMIS_17640 | Putative subtilase-family protease; Belongs to the peptidase S8 family. | Putative pyridine nucleotide-disulfide oxidoreductase. | 0.560 |
gpmA | AMIS_17640 | AMIS_76010 | AMIS_17640 | Putative phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Putative pyridine nucleotide-disulfide oxidoreductase. | 0.416 |