STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_18470Putative integral membrane protein. (479 aa)    
Predicted Functional Partners:
copC
Putative copper resistance protein CopC.
  
    0.893
copC2
Putative copper resistance protein CopC.
  
    0.807
copCD
Putative copper resistance protein CopCD.
  
    0.557
AMIS_9680
Putative copper resistance protein.
  
    0.557
AMIS_29200
Hypothetical protein.
  
    0.548
AMIS_29190
Putative peroxidase.
  
 0.547
AMIS_44410
Putative peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
 0.493
AMIS_5330
Hypothetical protein.
  
    0.483
AMIS_7050
Putative ABC transporter substrate-binding protein.
  
  
 0.440
AMIS_18490
Hypothetical protein.
       0.420
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.