STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_20940Putative phage terminase. (429 aa)    
Predicted Functional Partners:
AMIS_2540
Putative phage minor capsid protein.
 
    0.826
AMIS_2530
Putative phage minor capsid protein.
 
  
 0.808
AMIS_20950
Hypothetical protein.
       0.773
AMIS_20930
Hypothetical protein.
     
 0.768
AMIS_20910
Hypothetical protein.
     
 0.566
AMIS_20590
Hypothetical protein.
 
  
 0.531
AMIS_20920
Hypothetical protein.
       0.529
AMIS_20960
Hypothetical protein.
       0.519
AMIS_20970
Hypothetical protein.
       0.519
AMIS_20980
Hypothetical protein.
       0.516
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.