Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_19030 | AMIS_19400 | Putative acyl-CoA dehydrogenase. | Putative acetyl-CoA acetyltransferase. | 0.842 |
AMIS_19030 | AMIS_19410 | Putative acyl-CoA dehydrogenase. | Putative nonspecific lipid-transfer protein. | 0.844 |
AMIS_19030 | AMIS_19420 | Putative acyl-CoA dehydrogenase. | Hypothetical protein. | 0.774 |
AMIS_19030 | AMIS_21750 | Putative acyl-CoA dehydrogenase. | Putative pyridoxamine 5'-phosphate oxidase-related protein. | 0.482 |
AMIS_19030 | AMIS_21760 | Putative acyl-CoA dehydrogenase. | Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.598 |
AMIS_19400 | AMIS_19030 | Putative acetyl-CoA acetyltransferase. | Putative acyl-CoA dehydrogenase. | 0.842 |
AMIS_19400 | AMIS_19410 | Putative acetyl-CoA acetyltransferase. | Putative nonspecific lipid-transfer protein. | 0.867 |
AMIS_19400 | AMIS_19420 | Putative acetyl-CoA acetyltransferase. | Hypothetical protein. | 0.954 |
AMIS_19400 | AMIS_21750 | Putative acetyl-CoA acetyltransferase. | Putative pyridoxamine 5'-phosphate oxidase-related protein. | 0.502 |
AMIS_19400 | AMIS_21760 | Putative acetyl-CoA acetyltransferase. | Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.670 |
AMIS_19410 | AMIS_19030 | Putative nonspecific lipid-transfer protein. | Putative acyl-CoA dehydrogenase. | 0.844 |
AMIS_19410 | AMIS_19400 | Putative nonspecific lipid-transfer protein. | Putative acetyl-CoA acetyltransferase. | 0.867 |
AMIS_19410 | AMIS_19420 | Putative nonspecific lipid-transfer protein. | Hypothetical protein. | 0.978 |
AMIS_19410 | AMIS_21750 | Putative nonspecific lipid-transfer protein. | Putative pyridoxamine 5'-phosphate oxidase-related protein. | 0.618 |
AMIS_19410 | AMIS_21760 | Putative nonspecific lipid-transfer protein. | Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.630 |
AMIS_19420 | AMIS_19030 | Hypothetical protein. | Putative acyl-CoA dehydrogenase. | 0.774 |
AMIS_19420 | AMIS_19400 | Hypothetical protein. | Putative acetyl-CoA acetyltransferase. | 0.954 |
AMIS_19420 | AMIS_19410 | Hypothetical protein. | Putative nonspecific lipid-transfer protein. | 0.978 |
AMIS_19420 | AMIS_21750 | Hypothetical protein. | Putative pyridoxamine 5'-phosphate oxidase-related protein. | 0.673 |
AMIS_19420 | AMIS_21760 | Hypothetical protein. | Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.606 |
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