STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_21750Putative pyridoxamine 5'-phosphate oxidase-related protein. (151 aa)    
Predicted Functional Partners:
AMIS_21760
Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.835
AMIS_21770
Putative short-chain dehydrogenase.
  
    0.786
AMIS_21740
Putative TetR-family transcriptional regulator.
       0.762
AMIS_19420
Hypothetical protein.
 
     0.673
AMIS_19410
Putative nonspecific lipid-transfer protein.
 
     0.618
AMIS_53770
Hypothetical protein.
  
    0.579
AMIS_63980
Hypothetical protein.
  
    0.542
AMIS_32550
Putative pyridoxamine kinase; Belongs to the pyridoxine kinase family.
    
  0.513
AMIS_19400
Putative acetyl-CoA acetyltransferase.
  
     0.502
AMIS_19030
Putative acyl-CoA dehydrogenase.
  
     0.482
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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