STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_21900Putative carbohydrate binding domain. (809 aa)    
Predicted Functional Partners:
AMIS_61630
Glycosyl hydrolase family 3.
 
  
 0.942
AMIS_9980
Glycosyl hydrolase family 3, Carbohydrate binding module (family 6).
 
  
 0.939
AMIS_49860
Glycosyl hydrolase family 5, Cellulose binding domain.
 
  
 0.938
AMIS_37250
Glycosyl hydrolase family 3, Carbohydrate binding module (family 6).
 
  
 0.936
AMIS_35960
Glycosyl hydrolase family 3.
 
  
 0.934
AMIS_11780
Glycosyl hydrolase family 3, PA14 domain.
 
  
 0.931
AMIS_17150
Glycosyl hydrolase family 3; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.931
AMIS_29470
Glycosyl hydrolase family 3.
 
  
 0.930
AMIS_38990
Glycosyl hydrolase family 5, Cellulose binding domain, Fibronectin type III domain.
 
  
 0.929
AMIS_9970
Glycosyl hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.925
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.