STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_25390Hypothetical protein. (143 aa)    
Predicted Functional Partners:
AMIS_25410
Putative MarR-family transcriptional regulator.
 
    0.947
AMIS_25400
Hypothetical protein; Belongs to the UPF0310 family.
 
     0.814
AMIS_70220
Putative signal peptidase I; Belongs to the peptidase S26 family.
   
    0.804
AMIS_25380
Putative sulfotransferase.
       0.693
AMIS_64590
Hypothetical protein.
 
    0.467
AMIS_47640
Hypothetical protein; CsbD-like domain; Belongs to the UPF0337 (CsbD) family.
  
    0.456
AMIS_62350
Hypothetical protein.
   
    0.455
AMIS_25370
Hypothetical protein.
       0.454
AMIS_44150
Hypothetical protein.
  
    0.447
AMIS_58700
Hypothetical protein.
  
    0.447
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.