STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_27980Putative PaaX-like regulatory protein. (316 aa)    
Predicted Functional Partners:
AMIS_43500
Putative phenylacetic acid degradation protein.
 
  
 0.605
AMIS_43470
Hypothetical protein.
 
   
 0.592
AMIS_27960
Putative alpha-galactosidase; Glycosyl hydrolase, Melibiase, Ricin-type beta-trefoil lectin domain.
 
     0.541
AMIS_43480
Putative phenylacetic acid degradation protein.
 
  
 0.541
AMIS_30800
Putative PaaX-family transcriptional regulator.
  
     0.540
AMIS_43490
Putative phenylacetic acid degradation protein.
 
   
 0.499
AMIS_27970
Putative alpha-L-arabinofuranosidase.
       0.480
AMIS_27950
Hypothetical protein.
       0.455
AMIS_27990
Glycosyl hydrolase family 43.
       0.448
AMIS_28000
Glycosyl hydrolase family 43, Ricin-type beta-trefoil lectin domain; Belongs to the glycosyl hydrolase 43 family.
       0.440
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.