Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_28070 | AMIS_28080 | Hypothetical protein. | Hypothetical protein; Carbohydrate binding module (family 6). | 0.490 |
AMIS_28070 | AMIS_28090 | Hypothetical protein. | Protein of unknown function DUF1680. | 0.424 |
AMIS_28070 | AMIS_28100 | Hypothetical protein. | Putative ABC transporter permease protein. | 0.424 |
AMIS_28070 | AMIS_28110 | Hypothetical protein. | Putative ABC transporter permease protein. | 0.424 |
AMIS_28070 | AMIS_28120 | Hypothetical protein. | Putative ABC transporter substrate-binding protein. | 0.424 |
AMIS_28080 | AMIS_28070 | Hypothetical protein; Carbohydrate binding module (family 6). | Hypothetical protein. | 0.490 |
AMIS_28080 | AMIS_28090 | Hypothetical protein; Carbohydrate binding module (family 6). | Protein of unknown function DUF1680. | 0.778 |
AMIS_28080 | AMIS_28100 | Hypothetical protein; Carbohydrate binding module (family 6). | Putative ABC transporter permease protein. | 0.836 |
AMIS_28080 | AMIS_28110 | Hypothetical protein; Carbohydrate binding module (family 6). | Putative ABC transporter permease protein. | 0.795 |
AMIS_28080 | AMIS_28120 | Hypothetical protein; Carbohydrate binding module (family 6). | Putative ABC transporter substrate-binding protein. | 0.914 |
AMIS_28080 | AMIS_28130 | Hypothetical protein; Carbohydrate binding module (family 6). | Putative LacI-family transcriptional regulator. | 0.514 |
AMIS_28080 | AMIS_28140 | Hypothetical protein; Carbohydrate binding module (family 6). | Hypothetical protein; Carbohydrate binding module (family 6). | 0.491 |
AMIS_28090 | AMIS_28070 | Protein of unknown function DUF1680. | Hypothetical protein. | 0.424 |
AMIS_28090 | AMIS_28080 | Protein of unknown function DUF1680. | Hypothetical protein; Carbohydrate binding module (family 6). | 0.778 |
AMIS_28090 | AMIS_28100 | Protein of unknown function DUF1680. | Putative ABC transporter permease protein. | 0.832 |
AMIS_28090 | AMIS_28110 | Protein of unknown function DUF1680. | Putative ABC transporter permease protein. | 0.838 |
AMIS_28090 | AMIS_28120 | Protein of unknown function DUF1680. | Putative ABC transporter substrate-binding protein. | 0.898 |
AMIS_28090 | AMIS_28130 | Protein of unknown function DUF1680. | Putative LacI-family transcriptional regulator. | 0.636 |
AMIS_28090 | AMIS_28140 | Protein of unknown function DUF1680. | Hypothetical protein; Carbohydrate binding module (family 6). | 0.474 |
AMIS_28090 | AMIS_37300 | Protein of unknown function DUF1680. | Glycosyl hydrolase family 31; Belongs to the glycosyl hydrolase 31 family. | 0.538 |
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