STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_28090Protein of unknown function DUF1680. (640 aa)    
Predicted Functional Partners:
AMIS_28120
Putative ABC transporter substrate-binding protein.
 
     0.898
AMIS_28110
Putative ABC transporter permease protein.
 
     0.838
AMIS_28100
Putative ABC transporter permease protein.
 
     0.832
AMIS_28080
Hypothetical protein; Carbohydrate binding module (family 6).
 
     0.778
AMIS_44210
Putative alpha-L-arabinofuranosidase.
 
   
 0.702
AMIS_67540
Putative alpha-L-arabinofuranosidase.
 
   
 0.701
AMIS_28130
Putative LacI-family transcriptional regulator.
 
     0.636
AMIS_37300
Glycosyl hydrolase family 31; Belongs to the glycosyl hydrolase 31 family.
 
     0.538
AMIS_28140
Hypothetical protein; Carbohydrate binding module (family 6).
 
     0.474
AMIS_28070
Hypothetical protein.
       0.424
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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