STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_28770Putative phosphoribulokinase/uridine kinase. (220 aa)    
Predicted Functional Partners:
AMIS_74680
Putative uracil phosphoribosyltransferase; Belongs to the UPRTase family.
  
 0.956
pyrF
Putative orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 0.920
cmk
Putative cytidylate kinase.
   
 
 0.918
pyrH
Putative uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
 
 0.918
AMIS_44910
Putative phosphoribulokinase/uridine kinase.
  
  
 
0.912
AMIS_5080
Putative 5'-nucleotidase.
  
 
 0.912
AMIS_74820
Putative cytidine/deoxycytidine deaminase.
    
 0.909
pyrR
Putative pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
     
 0.908
surE
Putative stationary phase survival protein SurE.
     
 0.906
AMIS_12900
Putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family.
  
 
 0.905
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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