STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_28780Putative LuxR-family transcriptional regulator; CTG start. (104 aa)    
Predicted Functional Partners:
AMIS_30890
Putative multi-sensor signal transduction histidine kinase.
  
 
 0.644
AMIS_21140
Hypothetical protein.
  
     0.634
AMIS_30990
Putative multi-sensor signal transduction histidine kinase.
   
 
 0.626
AMIS_37680
Putative multi-sensor signal transduction histidine kinase.
  
 
 0.608
AMIS_25430
Hypothetical protein; Response regulator receiver domain.
   
 
 0.603
AMIS_24220
Putative LuxR-family transcriptional regulator.
 
 
 0.590
AMIS_67840
Hypothetical protein; GAF domain.
  
 
 0.590
AMIS_36070
Putative two-component system sensor kinase.
   
 
 0.589
AMIS_31000
Putative two-component system sensor kinase.
   
 
 0.548
AMIS_1810
Putative multi-sensor signal transduction histidine kinase.
   
 
 0.538
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.