STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_29010Putative ArsR-family transcriptional regulator. (179 aa)    
Predicted Functional Partners:
AMIS_29020
Putative MFS transporter.
 
     0.898
AMIS_43820
Hypothetical protein.
  
     0.738
AMIS_17760
Hypothetical protein.
  
     0.614
AMIS_11690
Hypothetical protein.
  
   
 0.604
AMIS_35180
Hypothetical protein.
  
     0.562
AMIS_22420
Hypothetical protein.
  
     0.554
AMIS_77320
Hypothetical protein; PQQ enzyme repeat.
  
     0.543
AMIS_17750
Hypothetical protein.
  
     0.534
AMIS_40950
Protein of unknown function DUF1503.
  
     0.532
AMIS_30840
Hypothetical protein.
  
     0.527
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.