Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMIS_29420 | AMIS_29430 | AMIS_29420 | AMIS_29430 | Putative nitroreductase. | Hypothetical protein. | 0.805 |
AMIS_29420 | AMIS_29440 | AMIS_29420 | AMIS_29440 | Putative nitroreductase. | Putative methyltransferase. | 0.928 |
AMIS_29420 | AMIS_29450 | AMIS_29420 | AMIS_29450 | Putative nitroreductase. | Putative MFS transporter. | 0.582 |
AMIS_29420 | AMIS_29460 | AMIS_29420 | AMIS_29460 | Putative nitroreductase. | Putative alpha-L-rhamnosidase. | 0.504 |
AMIS_29420 | AMIS_29470 | AMIS_29420 | AMIS_29470 | Putative nitroreductase. | Glycosyl hydrolase family 3. | 0.504 |
AMIS_29420 | AMIS_29480 | AMIS_29420 | AMIS_29480 | Putative nitroreductase. | Putative NAD-dependent epimerase/dehydratase. | 0.535 |
AMIS_29420 | AMIS_32320 | AMIS_29420 | AMIS_32320 | Putative nitroreductase. | Putative NRPS. | 0.423 |
AMIS_29420 | AMIS_32330 | AMIS_29420 | AMIS_32330 | Putative nitroreductase. | Putative NRPS. | 0.465 |
AMIS_29420 | AMIS_49650 | AMIS_29420 | AMIS_49650 | Putative nitroreductase. | Putative NRPS. | 0.569 |
AMIS_29430 | AMIS_29420 | AMIS_29430 | AMIS_29420 | Hypothetical protein. | Putative nitroreductase. | 0.805 |
AMIS_29430 | AMIS_29440 | AMIS_29430 | AMIS_29440 | Hypothetical protein. | Putative methyltransferase. | 0.832 |
AMIS_29430 | AMIS_29450 | AMIS_29430 | AMIS_29450 | Hypothetical protein. | Putative MFS transporter. | 0.504 |
AMIS_29430 | AMIS_29460 | AMIS_29430 | AMIS_29460 | Hypothetical protein. | Putative alpha-L-rhamnosidase. | 0.504 |
AMIS_29430 | AMIS_29470 | AMIS_29430 | AMIS_29470 | Hypothetical protein. | Glycosyl hydrolase family 3. | 0.504 |
AMIS_29430 | AMIS_29480 | AMIS_29430 | AMIS_29480 | Hypothetical protein. | Putative NAD-dependent epimerase/dehydratase. | 0.504 |
AMIS_29440 | AMIS_29420 | AMIS_29440 | AMIS_29420 | Putative methyltransferase. | Putative nitroreductase. | 0.928 |
AMIS_29440 | AMIS_29430 | AMIS_29440 | AMIS_29430 | Putative methyltransferase. | Hypothetical protein. | 0.832 |
AMIS_29440 | AMIS_29450 | AMIS_29440 | AMIS_29450 | Putative methyltransferase. | Putative MFS transporter. | 0.571 |
AMIS_29440 | AMIS_29460 | AMIS_29440 | AMIS_29460 | Putative methyltransferase. | Putative alpha-L-rhamnosidase. | 0.504 |
AMIS_29440 | AMIS_29470 | AMIS_29440 | AMIS_29470 | Putative methyltransferase. | Glycosyl hydrolase family 3. | 0.504 |
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