STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_29880Hypothetical protein. (746 aa)    
Predicted Functional Partners:
AMIS_10030
Hypothetical protein.
  
  
 
0.928
AMIS_29900
Putative alpha-galactosidase; Glycosyl hydrolase, Melibiase.
 
     0.806
AMIS_29890
Putative acetyl xylan esterase.
       0.785
AMIS_43730
Protein of unknown function DUF1680.
  
     0.754
AMIS_39850
Glycosyl hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.693
AMIS_10370
Putative pectinesterase; Ricin-type beta-trefoil lectin domain.
  
   
 0.692
AMIS_43710
Hypothetical protein.
 
 
   0.691
AMIS_43620
Glycosyl hydrolase family 10.
  
   
 0.681
AMIS_42910
Protein of unknown function DUF1680, Ricin-type beta-trefoil lectin domain.
  
     0.679
AMIS_24910
Protein of unknown function DUF1680.
  
     0.678
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.