Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMIS_30020 | AMIS_30030 | AMIS_30020 | AMIS_30030 | Hypothetical protein. | Putative two-component system sensor kinase. | 0.470 |
AMIS_30020 | AMIS_30040 | AMIS_30020 | AMIS_30040 | Hypothetical protein. | Hypothetical protein. | 0.470 |
AMIS_30020 | AMIS_30050 | AMIS_30020 | AMIS_30050 | Hypothetical protein. | Hypothetical protein; STAS domain. | 0.434 |
AMIS_30020 | egtD | AMIS_30020 | AMIS_61670 | Hypothetical protein. | Hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | 0.463 |
AMIS_30030 | AMIS_30020 | AMIS_30030 | AMIS_30020 | Putative two-component system sensor kinase. | Hypothetical protein. | 0.470 |
AMIS_30030 | AMIS_30040 | AMIS_30030 | AMIS_30040 | Putative two-component system sensor kinase. | Hypothetical protein. | 0.866 |
AMIS_30030 | AMIS_30050 | AMIS_30030 | AMIS_30050 | Putative two-component system sensor kinase. | Hypothetical protein; STAS domain. | 0.518 |
AMIS_30040 | AMIS_30020 | AMIS_30040 | AMIS_30020 | Hypothetical protein. | Hypothetical protein. | 0.470 |
AMIS_30040 | AMIS_30030 | AMIS_30040 | AMIS_30030 | Hypothetical protein. | Putative two-component system sensor kinase. | 0.866 |
AMIS_30040 | AMIS_30050 | AMIS_30040 | AMIS_30050 | Hypothetical protein. | Hypothetical protein; STAS domain. | 0.522 |
AMIS_30050 | AMIS_30020 | AMIS_30050 | AMIS_30020 | Hypothetical protein; STAS domain. | Hypothetical protein. | 0.434 |
AMIS_30050 | AMIS_30030 | AMIS_30050 | AMIS_30030 | Hypothetical protein; STAS domain. | Putative two-component system sensor kinase. | 0.518 |
AMIS_30050 | AMIS_30040 | AMIS_30050 | AMIS_30040 | Hypothetical protein; STAS domain. | Hypothetical protein. | 0.522 |
egtD | AMIS_30020 | AMIS_61670 | AMIS_30020 | Hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | Hypothetical protein. | 0.463 |