Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AMIS_22800 | AMIS_30110 | Putative GntR-family transcriptional regulator. | Putative MerR-family transcriptional regulator. | 0.474 |
AMIS_30090 | AMIS_30100 | Hypothetical protein; Fibronectin type III domain. | Putative sulfate transporter. | 0.468 |
AMIS_30090 | AMIS_30110 | Hypothetical protein; Fibronectin type III domain. | Putative MerR-family transcriptional regulator. | 0.451 |
AMIS_30100 | AMIS_30090 | Putative sulfate transporter. | Hypothetical protein; Fibronectin type III domain. | 0.468 |
AMIS_30100 | AMIS_30110 | Putative sulfate transporter. | Putative MerR-family transcriptional regulator. | 0.813 |
AMIS_30110 | AMIS_22800 | Putative MerR-family transcriptional regulator. | Putative GntR-family transcriptional regulator. | 0.474 |
AMIS_30110 | AMIS_30090 | Putative MerR-family transcriptional regulator. | Hypothetical protein; Fibronectin type III domain. | 0.451 |
AMIS_30110 | AMIS_30100 | Putative MerR-family transcriptional regulator. | Putative sulfate transporter. | 0.813 |
AMIS_30110 | AMIS_33010 | Putative MerR-family transcriptional regulator. | Putative MerR-family transcriptional regulator. | 0.661 |
AMIS_30110 | AMIS_37680 | Putative MerR-family transcriptional regulator. | Putative multi-sensor signal transduction histidine kinase. | 0.457 |
AMIS_30110 | AMIS_45760 | Putative MerR-family transcriptional regulator. | Putative MerR-family transcriptional regulator. | 0.659 |
AMIS_30110 | AMIS_48050 | Putative MerR-family transcriptional regulator. | Putative MerR-family transcriptional regulator. | 0.715 |
AMIS_30110 | AMIS_68360 | Putative MerR-family transcriptional regulator. | Hypothetical protein. | 0.458 |
AMIS_30110 | AMIS_80050 | Putative MerR-family transcriptional regulator. | Putative MerR-family transcriptional regulator. | 0.601 |
AMIS_30110 | AMIS_930 | Putative MerR-family transcriptional regulator. | Hypothetical protein. | 0.458 |
AMIS_33010 | AMIS_30110 | Putative MerR-family transcriptional regulator. | Putative MerR-family transcriptional regulator. | 0.661 |
AMIS_33010 | AMIS_37680 | Putative MerR-family transcriptional regulator. | Putative multi-sensor signal transduction histidine kinase. | 0.457 |
AMIS_33010 | AMIS_45760 | Putative MerR-family transcriptional regulator. | Putative MerR-family transcriptional regulator. | 0.591 |
AMIS_33010 | AMIS_68360 | Putative MerR-family transcriptional regulator. | Hypothetical protein. | 0.458 |
AMIS_33010 | AMIS_930 | Putative MerR-family transcriptional regulator. | Hypothetical protein. | 0.458 |
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