STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxBPutative ferredoxin. (65 aa)    
Predicted Functional Partners:
fprB
Putative ferredoxin reductase.
 
   
 0.894
AMIS_30360
Putative cytochrome P450.
 
  
 0.835
AMIS_30390
Putative short-chain dehydrogenase.
       0.773
AMIS_75710
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
 
   
 0.524
AMIS_30350
Putative two-component system response regulator.
       0.482
AMIS_22490
Putative cytochrome P450.
 
  
 0.472
AMIS_76050
Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.468
AMIS_50110
Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.445
AMIS_63550
Putative DNA-binding protein.
  
     0.417
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.