STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_30650Cellulose binding domain. (432 aa)    
Predicted Functional Partners:
AMIS_43620
Glycosyl hydrolase family 10.
 
 
 0.857
AMIS_32500
Putative xylanase; Glycosyl hydrolase family 10, Ricin-type beta-trefoil lectin domain.
 
 
 0.801
AMIS_28340
Glycosyl hydrolase family 62, Ricin-type beta-trefoil lectin domain.
 
 
   0.795
AMIS_71340
Putative pectate lyase; Ricin-type beta-trefoil lectin domain.
 
   0.794
AMIS_65590
Putative pectate lyase.
 
   0.783
AMIS_59380
Hypothetical protein.
 
   
 0.776
AMIS_28300
Ricin-type beta-trefoil lectin domain.
 
 0.772
AMIS_33480
Glycosyl hydrolase family 11, Cellulose binding domain; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.772
AMIS_1830
Putative pectate lyase.
 
   0.769
AMIS_28790
Putative pectate lyase; F5/8 type C domain.
 
   0.736
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.