Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMIS_22870 | AMIS_31410 | AMIS_22870 | AMIS_31410 | Putative regulatory protein; NACHT domain. | Putative GCN5-related N-acetyltransferase. | 0.497 |
AMIS_22870 | AMIS_58990 | AMIS_22870 | AMIS_58990 | Putative regulatory protein; NACHT domain. | Putative SARP-family transcriptional regulator. | 0.754 |
AMIS_31400 | AMIS_31410 | AMIS_31400 | AMIS_31410 | Putative D-alanyl-D-alanine carboxypeptidase. | Putative GCN5-related N-acetyltransferase. | 0.518 |
AMIS_31400 | AMIS_31420 | AMIS_31400 | AMIS_31420 | Putative D-alanyl-D-alanine carboxypeptidase. | Hypothetical protein. | 0.438 |
AMIS_31400 | AMIS_32320 | AMIS_31400 | AMIS_32320 | Putative D-alanyl-D-alanine carboxypeptidase. | Putative NRPS. | 0.637 |
AMIS_31400 | AMIS_49650 | AMIS_31400 | AMIS_49650 | Putative D-alanyl-D-alanine carboxypeptidase. | Putative NRPS. | 0.750 |
AMIS_31400 | AMIS_49720 | AMIS_31400 | AMIS_49720 | Putative D-alanyl-D-alanine carboxypeptidase. | Hypothetical protein; Condensation domain of NRPS. | 0.629 |
AMIS_31410 | AMIS_22870 | AMIS_31410 | AMIS_22870 | Putative GCN5-related N-acetyltransferase. | Putative regulatory protein; NACHT domain. | 0.497 |
AMIS_31410 | AMIS_31400 | AMIS_31410 | AMIS_31400 | Putative GCN5-related N-acetyltransferase. | Putative D-alanyl-D-alanine carboxypeptidase. | 0.518 |
AMIS_31410 | AMIS_31420 | AMIS_31410 | AMIS_31420 | Putative GCN5-related N-acetyltransferase. | Hypothetical protein. | 0.639 |
AMIS_31410 | AMIS_32320 | AMIS_31410 | AMIS_32320 | Putative GCN5-related N-acetyltransferase. | Putative NRPS. | 0.584 |
AMIS_31410 | AMIS_49650 | AMIS_31410 | AMIS_49650 | Putative GCN5-related N-acetyltransferase. | Putative NRPS. | 0.498 |
AMIS_31410 | AMIS_49720 | AMIS_31410 | AMIS_49720 | Putative GCN5-related N-acetyltransferase. | Hypothetical protein; Condensation domain of NRPS. | 0.505 |
AMIS_31410 | AMIS_58990 | AMIS_31410 | AMIS_58990 | Putative GCN5-related N-acetyltransferase. | Putative SARP-family transcriptional regulator. | 0.545 |
AMIS_31410 | AMIS_60510 | AMIS_31410 | AMIS_60510 | Putative GCN5-related N-acetyltransferase. | Glycosyl hydrolase family 18, Ricin-type beta-trefoil lectin domain; Belongs to the glycosyl hydrolase 18 family. | 0.582 |
AMIS_31410 | sidC | AMIS_31410 | AMIS_67510 | Putative GCN5-related N-acetyltransferase. | Putative cadaverine N-monooxygenase. | 0.421 |
AMIS_31420 | AMIS_31400 | AMIS_31420 | AMIS_31400 | Hypothetical protein. | Putative D-alanyl-D-alanine carboxypeptidase. | 0.438 |
AMIS_31420 | AMIS_31410 | AMIS_31420 | AMIS_31410 | Hypothetical protein. | Putative GCN5-related N-acetyltransferase. | 0.639 |
AMIS_32320 | AMIS_31400 | AMIS_32320 | AMIS_31400 | Putative NRPS. | Putative D-alanyl-D-alanine carboxypeptidase. | 0.637 |
AMIS_32320 | AMIS_31410 | AMIS_32320 | AMIS_31410 | Putative NRPS. | Putative GCN5-related N-acetyltransferase. | 0.584 |
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