STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_3170Putative type II secretion system protein. (411 aa)    
Predicted Functional Partners:
AMIS_3190
Putative type II secretion system protein.
 
  
 0.977
AMIS_3180
Putative type II secretion system protein.
  
  
 0.950
AMIS_3160
Hypothetical protein; CobQ/CobB/MinD/ParA nucleotide-binding domain.
       0.888
AMIS_3200
Hypothetical protein.
     
 0.872
AMIS_3220
Hypothetical protein.
     
 0.768
AMIS_75350
Hypothetical protein.
  
  
 0.646
AMIS_3210
Hypothetical protein.
       0.617
AMIS_3140
Putative haloacid dehalogenase-like hydrolase.
       0.497
AMIS_3150
Hypothetical protein; STAS domain; Belongs to the anti-sigma-factor antagonist family.
       0.485
AMIS_70220
Putative signal peptidase I; Belongs to the peptidase S26 family.
     
 0.449
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.