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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_32040Putative ABC transporter substrate-binding protein. (552 aa)    
Predicted Functional Partners:
AMIS_32020
Putative ABC transporter permease protein.
 
 
 0.961
AMIS_32030
Putative ABC transporter permease protein.
 
 
 0.957
AMIS_32010
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.943
AMIS_32000
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.912
AMIS_7060
Putative ABC transporter permease protein.
 
 
 0.798
AMIS_47220
Putative ABC transporter permease protein.
 
 0.793
AMIS_56620
Putative ABC transporter permease protein.
 
 0.788
AMIS_64440
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.781
AMIS_56610
Putative ABC transporter permease protein.
 
 
 0.778
AMIS_24580
Putative ABC transporter permease protein.
 
 0.774
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.