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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMIS_32050Putative pyridoxamine 5'-phosphate oxidase-related protein. (150 aa)    
Predicted Functional Partners:
AMIS_32060
Putative TetR-family transcriptional regulator.
       0.606
AMIS_15710
Putative glutamate synthase large subunit.
     
 0.602
AMIS_49840
Hypothetical protein.
  
     0.549
AMIS_44390
Putative iron permease.
   
    0.548
AMIS_32550
Putative pyridoxamine kinase; Belongs to the pyridoxine kinase family.
     
  0.499
AMIS_2080
Putative iron ABC transporter substrate-binding protein.
  
    0.456
AMIS_25070
Putative ABC transporter substrate-binding protein.
  
    0.456
AMIS_29220
Putative ABC transporter substrate-binding protein.
  
    0.456
AMIS_35500
Putative ABC transporter substrate-binding protein.
  
    0.456
AMIS_43310
Putative ABC transporter substrate-binding protein.
  
    0.456
Your Current Organism:
Actinoplanes missouriensis
NCBI taxonomy Id: 512565
Other names: A. missouriensis 431, Actinoplanes missouriensis 431, Actinoplanes missouriensis str. 431, Actinoplanes missouriensis strain 431
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